Summary

Started	2023-08-11 12:59:06
Ended	2023-08-11 13:00:35
Duration	0:01:29.408064
Total run time	0:01:21.620535

41 passed

Warnings

WARNING

/root/mambaforge/envs/ci_env/lib/python3.9/site-packages/sklearn/linear_model/_least_angle.py:34
`np.float` is a deprecated alias for the builtin `float`. To silence this warning, use `float` by itself. Doing this will not modify any behavior and is safe. If you specifically wanted the numpy scalar type, use `np.float64` here. Deprecated in NumPy 1.20; for more details and guidance: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations

WARNING

/root/mambaforge/envs/ci_env/lib/python3.9/site-packages/sklearn/linear_model/_least_angle.py:164
`np.float` is a deprecated alias for the builtin `float`. To silence this warning, use `float` by itself. Doing this will not modify any behavior and is safe. If you specifically wanted the numpy scalar type, use `np.float64` here. Deprecated in NumPy 1.20; for more details and guidance: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations

WARNING

/root/mambaforge/envs/ci_env/lib/python3.9/site-packages/sklearn/linear_model/_least_angle.py:281
`np.float` is a deprecated alias for the builtin `float`. To silence this warning, use `float` by itself. Doing this will not modify any behavior and is safe. If you specifically wanted the numpy scalar type, use `np.float64` here. Deprecated in NumPy 1.20; for more details and guidance: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations

WARNING

/root/mambaforge/envs/ci_env/lib/python3.9/site-packages/sklearn/linear_model/_least_angle.py:865
`np.float` is a deprecated alias for the builtin `float`. To silence this warning, use `float` by itself. Doing this will not modify any behavior and is safe. If you specifically wanted the numpy scalar type, use `np.float64` here. Deprecated in NumPy 1.20; for more details and guidance: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations

WARNING

/root/mambaforge/envs/ci_env/lib/python3.9/site-packages/sklearn/linear_model/_least_angle.py:1121
`np.float` is a deprecated alias for the builtin `float`. To silence this warning, use `float` by itself. Doing this will not modify any behavior and is safe. If you specifically wanted the numpy scalar type, use `np.float64` here. Deprecated in NumPy 1.20; for more details and guidance: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations

WARNING

/root/mambaforge/envs/ci_env/lib/python3.9/site-packages/sklearn/linear_model/_least_angle.py:1149
`np.float` is a deprecated alias for the builtin `float`. To silence this warning, use `float` by itself. Doing this will not modify any behavior and is safe. If you specifically wanted the numpy scalar type, use `np.float64` here. Deprecated in NumPy 1.20; for more details and guidance: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations

WARNING

/root/mambaforge/envs/ci_env/lib/python3.9/site-packages/sklearn/linear_model/_least_angle.py:1379
`np.float` is a deprecated alias for the builtin `float`. To silence this warning, use `float` by itself. Doing this will not modify any behavior and is safe. If you specifically wanted the numpy scalar type, use `np.float64` here. Deprecated in NumPy 1.20; for more details and guidance: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations

WARNING

/root/mambaforge/envs/ci_env/lib/python3.9/site-packages/sklearn/linear_model/_least_angle.py:1621
`np.float` is a deprecated alias for the builtin `float`. To silence this warning, use `float` by itself. Doing this will not modify any behavior and is safe. If you specifically wanted the numpy scalar type, use `np.float64` here. Deprecated in NumPy 1.20; for more details and guidance: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations

WARNING

/root/mambaforge/envs/ci_env/lib/python3.9/site-packages/sklearn/linear_model/_least_angle.py:1755
`np.float` is a deprecated alias for the builtin `float`. To silence this warning, use `float` by itself. Doing this will not modify any behavior and is safe. If you specifically wanted the numpy scalar type, use `np.float64` here. Deprecated in NumPy 1.20; for more details and guidance: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations

WARNING

/root/mambaforge/envs/ci_env/lib/python3.9/site-packages/sklearn/decomposition/_lda.py:28
`np.float` is a deprecated alias for the builtin `float`. To silence this warning, use `float` by itself. Doing this will not modify any behavior and is safe. If you specifically wanted the numpy scalar type, use `np.float64` here. Deprecated in NumPy 1.20; for more details and guidance: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations

WARNING

/root/mambaforge/envs/ci_env/lib/python3.9/site-packages/sklearn/ensemble/_gb.py:33
`np.bool` is a deprecated alias for the builtin `bool`. To silence this warning, use `bool` by itself. Doing this will not modify any behavior and is safe. If you specifically wanted the numpy scalar type, use `np.bool_` here. Deprecated in NumPy 1.20; for more details and guidance: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations

WARNING

/root/mambaforge/envs/ci_env/lib/python3.9/site-packages/sklearn/metrics/pairwise.py:58
`np.float` is a deprecated alias for the builtin `float`. To silence this warning, use `float` by itself. Doing this will not modify any behavior and is safe. If you specifically wanted the numpy scalar type, use `np.float64` here. Deprecated in NumPy 1.20; for more details and guidance: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations

WARNING

/root/mambaforge/envs/ci_env/lib/python3.9/site-packages/sklearn/ensemble/_base.py:183
`np.int` is a deprecated alias for the builtin `int`. To silence this warning, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. Deprecated in NumPy 1.20; for more details and guidance: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations

WARNING

/root/mambaforge/envs/ci_env/lib/python3.9/site-packages/sklearn/ensemble/_forest.py:569
`np.int` is a deprecated alias for the builtin `int`. To silence this warning, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. Deprecated in NumPy 1.20; for more details and guidance: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations

WARNING

/root/mambaforge/envs/ci_env/lib/python3.9/site-packages/sklearn/tree/_classes.py:190
`np.int` is a deprecated alias for the builtin `int`. To silence this warning, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information. Deprecated in NumPy 1.20; for more details and guidance: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations

WARNING

Tests

tests/test_classifier.py 6 0:00:01.343535

PASSED Test_ClusterClassifier::test_collect_stats 0:00:00.185279

Started	2023-08-11 12:59:10
Ended	2023-08-11 12:59:10
Duration	0:00:00.185279
Markers
Fixtures	unittest_setUpClass_fixture_Test_ClusterClassifier request

Setup

Call

Teardown

PASSED Test_ClusterClassifier::test_plot_sample_spectra__all_clusters 0:00:00.566086

Started	2023-08-11 12:59:10
Ended	2023-08-11 12:59:10
Duration	0:00:00.566086
Markers
Fixtures	unittest_setUpClass_fixture_Test_ClusterClassifier request

Setup

Call

Captured stderr call


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100%|██████████| 3/3 [00:00<00:00, 11.77it/s]

Teardown

PASSED Test_ClusterClassifier::test_plot_sample_spectra__selected_clusters 0:00:00.358711

Started	2023-08-11 12:59:10
Ended	2023-08-11 12:59:11
Duration	0:00:00.358711
Markers
Fixtures	unittest_setUpClass_fixture_Test_ClusterClassifier request

Setup

Call

Captured stderr call


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100%|██████████| 2/2 [00:00<00:00, 11.64it/s]

Teardown

PASSED Test_ClusterClassifier::test_plot_sample_spectra__single_cluster 0:00:00.193815

Started	2023-08-11 12:59:11
Ended	2023-08-11 12:59:11
Duration	0:00:00.193815
Markers
Fixtures	unittest_setUpClass_fixture_Test_ClusterClassifier request

Setup

Call

Teardown

PASSED Test_ClusterClassifier::test_save_to_json 0:00:00.020632

Started	2023-08-11 12:59:11
Ended	2023-08-11 12:59:11
Duration	0:00:00.020632
Markers
Fixtures	unittest_setUpClass_fixture_Test_ClusterClassifier request

Setup

Call

Teardown

PASSED Test_ClusterClassifier::test_to_jsonable_dict 0:00:00.019012

Started	2023-08-11 12:59:11
Ended	2023-08-11 12:59:11
Duration	0:00:00.019012
Markers
Fixtures	unittest_setUpClass_fixture_Test_ClusterClassifier request

Setup

Call

Teardown

tests/test_classifier_creation.py 10 0:00:36.180190

PASSED Test_ReferenceCube_Generator::test_cluster_image_and_get_uniform_samples 0:00:01.331949

Started	2023-08-11 12:59:11
Ended	2023-08-11 12:59:12
Duration	0:00:01.331949
Markers
Fixtures	unittest_setUpClass_fixture_Test_ReferenceCube_Generator request

Setup

Call

Captured stdout call

2023/08/11 12:59:11:   Computing 5 KMeans clusters from the input image AV_mastercal_testdata...
Writing GeoArray of size (50, 50) to /tmp/tmpvuc84xwd/AV_mastercal_testdata__KMeansClusterMap_nclust5.bsq.
2023/08/11 12:59:12:   Getting 100 random spectra from each cluster...
Performing spectral angle mapper (SAM) image classification...
2023/08/11 12:59:12:   Combining random samples from all clusters.

Captured stderr call


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Teardown

PASSED Test_ReferenceCube_Generator::test_generate_reference_cube 0:00:12.700692

Started	2023-08-11 12:59:12
Ended	2023-08-11 12:59:25
Duration	0:00:12.700692
Markers
Fixtures	unittest_setUpClass_fixture_Test_ReferenceCube_Generator request

Setup

Call

Captured stdout call

2023/08/11 12:59:12:   Reading previously serialized KMeans classifier from /tmp/tmpvuc84xwd/AV_mastercal_testdata__KMeansClf.dill...
2023/08/11 12:59:12:   Getting 100 random spectra from each cluster...
Performing spectral angle mapper (SAM) image classification...
2023/08/11 12:59:13:   Combining random samples from all clusters.
2023/08/11 12:59:13:   Performing spectral resampling to match Landsat-8 OLI_TIRS specifications...
2023/08/11 12:59:13:   Performing spectral resampling to match spectral properties of Landsat-8 OLI_TIRS...
Writing GeoArray of size (500, 1, 7) to /tmp/tmpvuc84xwd/refcube__Landsat-8__OLI_TIRS__nclust5__nsamp500.bsq.
2023/08/11 12:59:14:   Performing spectral resampling to match Landsat-7 ETM+ specifications...
2023/08/11 12:59:14:   Performing spectral resampling to match spectral properties of Landsat-7 ETM+...
Writing GeoArray of size (500, 1, 7) to /tmp/tmpvuc84xwd/refcube__Landsat-7__ETM+__nclust5__nsamp500.bsq.
2023/08/11 12:59:14:   Performing spectral resampling to match Landsat-5 TM specifications...
2023/08/11 12:59:15:   Performing spectral resampling to match spectral properties of Landsat-5 TM...
Writing GeoArray of size (500, 1, 6) to /tmp/tmpvuc84xwd/refcube__Landsat-5__TM__nclust5__nsamp500.bsq.
2023/08/11 12:59:15:   Performing spectral resampling to match Sentinel-2A MSI specifications...
2023/08/11 12:59:15:   Performing spectral resampling to match spectral properties of Sentinel-2A MSI...
Writing GeoArray of size (500, 1, 11) to /tmp/tmpvuc84xwd/refcube__Sentinel-2A__MSI__nclust5__nsamp500.bsq.
2023/08/11 12:59:16:   Performing spectral resampling to match SPOT-4 HRVIR1 specifications...
2023/08/11 12:59:16:   Performing spectral resampling to match spectral properties of SPOT-4 HRVIR1...
Writing GeoArray of size (500, 1, 5) to /tmp/tmpvuc84xwd/refcube__SPOT-4__HRVIR1__nclust5__nsamp500.bsq.
2023/08/11 12:59:17:   Performing spectral resampling to match SPOT-4 HRVIR2 specifications...
2023/08/11 12:59:17:   Performing spectral resampling to match spectral properties of SPOT-4 HRVIR2...
Writing GeoArray of size (500, 1, 5) to /tmp/tmpvuc84xwd/refcube__SPOT-4__HRVIR2__nclust5__nsamp500.bsq.
2023/08/11 12:59:17:   Performing spectral resampling to match SPOT-5 HRG1 specifications...
2023/08/11 12:59:17:   Performing spectral resampling to match spectral properties of SPOT-5 HRG1...
Writing GeoArray of size (500, 1, 5) to /tmp/tmpvuc84xwd/refcube__SPOT-5__HRG1__nclust5__nsamp500.bsq.
2023/08/11 12:59:18:   Performing spectral resampling to match SPOT-5 HRG2 specifications...
2023/08/11 12:59:18:   Performing spectral resampling to match spectral properties of SPOT-5 HRG2...
Writing GeoArray of size (500, 1, 5) to /tmp/tmpvuc84xwd/refcube__SPOT-5__HRG2__nclust5__nsamp500.bsq.
2023/08/11 12:59:19:   Performing spectral resampling to match RapidEye-5 MSI specifications...
2023/08/11 12:59:19:   Performing spectral resampling to match spectral properties of RapidEye-5 MSI...
Writing GeoArray of size (500, 1, 5) to /tmp/tmpvuc84xwd/refcube__RapidEye-5__MSI__nclust5__nsamp500.bsq.
2023/08/11 12:59:19:   Reading previously serialized KMeans classifier from /tmp/tmpvuc84xwd/AV_mastercal_testdata__KMeansClf.dill...
2023/08/11 12:59:19:   Getting 100 random spectra from each cluster...
Performing spectral angle mapper (SAM) image classification...
2023/08/11 12:59:20:   Combining random samples from all clusters.
2023/08/11 12:59:20:   Performing spectral resampling to match Landsat-8 OLI_TIRS specifications...
2023/08/11 12:59:20:   Performing spectral resampling to match spectral properties of Landsat-8 OLI_TIRS...
Writing GeoArray of size (500, 2, 7) to /tmp/tmpvuc84xwd/refcube__Landsat-8__OLI_TIRS__nclust5__nsamp500.bsq.
2023/08/11 12:59:20:   Performing spectral resampling to match Landsat-7 ETM+ specifications...
2023/08/11 12:59:21:   Performing spectral resampling to match spectral properties of Landsat-7 ETM+...
Writing GeoArray of size (500, 2, 7) to /tmp/tmpvuc84xwd/refcube__Landsat-7__ETM+__nclust5__nsamp500.bsq.
2023/08/11 12:59:21:   Performing spectral resampling to match Landsat-5 TM specifications...
2023/08/11 12:59:21:   Performing spectral resampling to match spectral properties of Landsat-5 TM...
Writing GeoArray of size (500, 2, 6) to /tmp/tmpvuc84xwd/refcube__Landsat-5__TM__nclust5__nsamp500.bsq.
2023/08/11 12:59:22:   Performing spectral resampling to match Sentinel-2A MSI specifications...
2023/08/11 12:59:22:   Performing spectral resampling to match spectral properties of Sentinel-2A MSI...
Writing GeoArray of size (500, 2, 11) to /tmp/tmpvuc84xwd/refcube__Sentinel-2A__MSI__nclust5__nsamp500.bsq.
2023/08/11 12:59:23:   Performing spectral resampling to match SPOT-4 HRVIR1 specifications...
2023/08/11 12:59:23:   Performing spectral resampling to match spectral properties of SPOT-4 HRVIR1...
Writing GeoArray of size (500, 2, 5) to /tmp/tmpvuc84xwd/refcube__SPOT-4__HRVIR1__nclust5__nsamp500.bsq.
2023/08/11 12:59:23:   Performing spectral resampling to match SPOT-4 HRVIR2 specifications...
2023/08/11 12:59:23:   Performing spectral resampling to match spectral properties of SPOT-4 HRVIR2...
Writing GeoArray of size (500, 2, 5) to /tmp/tmpvuc84xwd/refcube__SPOT-4__HRVIR2__nclust5__nsamp500.bsq.
2023/08/11 12:59:24:   Performing spectral resampling to match SPOT-5 HRG1 specifications...
2023/08/11 12:59:24:   Performing spectral resampling to match spectral properties of SPOT-5 HRG1...
Writing GeoArray of size (500, 2, 5) to /tmp/tmpvuc84xwd/refcube__SPOT-5__HRG1__nclust5__nsamp500.bsq.
2023/08/11 12:59:24:   Performing spectral resampling to match SPOT-5 HRG2 specifications...
2023/08/11 12:59:24:   Performing spectral resampling to match spectral properties of SPOT-5 HRG2...
Writing GeoArray of size (500, 2, 5) to /tmp/tmpvuc84xwd/refcube__SPOT-5__HRG2__nclust5__nsamp500.bsq.
2023/08/11 12:59:25:   Performing spectral resampling to match RapidEye-5 MSI specifications...
2023/08/11 12:59:25:   Performing spectral resampling to match spectral properties of RapidEye-5 MSI...
Writing GeoArray of size (500, 2, 5) to /tmp/tmpvuc84xwd/refcube__RapidEye-5__MSI__nclust5__nsamp500.bsq.

Captured stderr call

Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)

Teardown

PASSED Test_ReferenceCube_Generator::test_resample_spectra 0:00:01.791302

Started	2023-08-11 12:59:25
Ended	2023-08-11 12:59:27
Duration	0:00:01.791302
Markers
Fixtures	unittest_setUpClass_fixture_Test_ReferenceCube_Generator request

Setup

Call

Captured stdout call

2023/08/11 12:59:25:   Computing 5 KMeans clusters from the input image AV_mastercal_testdata...
2023/08/11 12:59:26:   Getting 100 random spectra from each cluster...
Performing spectral angle mapper (SAM) image classification...
2023/08/11 12:59:26:   Combining random samples from all clusters.
2023/08/11 12:59:26:   Performing spectral resampling to match spectral properties of Sentinel-2A MSI...

Captured stderr call


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Teardown

PASSED Test_ClusterClassifier_Generator::test_create_classifiers_LR 0:00:03.875010

Test creation of linear regression classifiers.

Started	2023-08-11 12:59:27
Ended	2023-08-11 12:59:31
Duration	0:00:03.875010
Markers
Fixtures	unittest_setUpClass_fixture_Test_ClusterClassifier_Generator request

Setup

Call

Captured stdout call

2023/08/11 12:59:27:   Clustering Landsat-8 OLI_TIRS reference cube (5 clusters)...
Performing spectral angle mapper (SAM) image classification...
2023/08/11 12:59:29:   Creating LR cluster classifier to predict Sentinel-2A MSI from Landsat-8 OLI_TIRS...
2023/08/11 12:59:29:   Clustering Sentinel-2A MSI reference cube (5 clusters)...
Performing spectral angle mapper (SAM) image classification...
2023/08/11 12:59:31:   Creating LR cluster classifier to predict Landsat-8 OLI_TIRS from Sentinel-2A MSI...

Captured stderr call

Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
2023/08/11 12:59:29:   Had to choose spectra with SD up to 353.2 for cluster #0.
2023/08/11 12:59:29:   Had to choose spectra with SD up to 847.7 for cluster #3.
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
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Coverage.py warning: No data was collected. (no-data-collected)
2023/08/11 12:59:31:   Had to choose spectra with SD up to 904.2 for cluster #3.

Teardown

PASSED Test_ClusterClassifier_Generator::test_create_classifiers_QR 0:00:04.130390

Test creation of quadratic regression classifiers.

Started	2023-08-11 12:59:31
Ended	2023-08-11 12:59:35
Duration	0:00:04.130390
Markers
Fixtures	unittest_setUpClass_fixture_Test_ClusterClassifier_Generator request

Setup

Call

Captured stdout call

2023/08/11 12:59:31:   Clustering Landsat-8 OLI_TIRS reference cube (5 clusters)...
Performing spectral angle mapper (SAM) image classification...
2023/08/11 12:59:33:   Creating QR cluster classifier to predict Landsat-5 TM from Landsat-8 OLI_TIRS...
2023/08/11 12:59:33:   Clustering Landsat-5 TM reference cube (5 clusters)...
Performing spectral angle mapper (SAM) image classification...
2023/08/11 12:59:35:   Creating QR cluster classifier to predict Landsat-8 OLI_TIRS from Landsat-5 TM...

Captured stderr call

Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
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Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)

Teardown

PASSED Test_ClusterClassifier_Generator::test_create_classifiers_RFR 0:00:03.027047

Test creation of random forest regression classifiers.

Started	2023-08-11 12:59:35
Ended	2023-08-11 12:59:38
Duration	0:00:03.027047
Markers
Fixtures	unittest_setUpClass_fixture_Test_ClusterClassifier_Generator request

Setup

Call

Captured stdout call

2023/08/11 12:59:35:   Clustering Landsat-8 OLI_TIRS reference cube (1 clusters)...
Performing spectral angle mapper (SAM) image classification...
2023/08/11 12:59:36:   Creating RFR cluster classifier to predict Sentinel-2A MSI from Landsat-8 OLI_TIRS...
2023/08/11 12:59:37:   Clustering Sentinel-2A MSI reference cube (1 clusters)...
Performing spectral angle mapper (SAM) image classification...
2023/08/11 12:59:38:   Creating RFR cluster classifier to predict Landsat-8 OLI_TIRS from Sentinel-2A MSI...

Captured stderr call

Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
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Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)

Teardown

PASSED Test_ClusterClassifier_Generator::test_create_classifiers_RR 0:00:03.955245

Test creation of ridge regression classifiers.

Started	2023-08-11 12:59:38
Ended	2023-08-11 12:59:42
Duration	0:00:03.955245
Markers
Fixtures	unittest_setUpClass_fixture_Test_ClusterClassifier_Generator request

Setup

Call

Captured stdout call

2023/08/11 12:59:38:   Clustering Landsat-8 OLI_TIRS reference cube (5 clusters)...
Performing spectral angle mapper (SAM) image classification...
2023/08/11 12:59:40:   Creating RR cluster classifier to predict Landsat-5 TM from Landsat-8 OLI_TIRS...
2023/08/11 12:59:40:   Clustering Landsat-5 TM reference cube (5 clusters)...
Performing spectral angle mapper (SAM) image classification...
2023/08/11 12:59:42:   Creating RR cluster classifier to predict Landsat-8 OLI_TIRS from Landsat-5 TM...

Captured stderr call

Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
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Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
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Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)

Teardown

PASSED Test_ClusterClassifier_Generator::test_init_from_RefCubes 0:00:00.003871

Started	2023-08-11 12:59:42
Ended	2023-08-11 12:59:42
Duration	0:00:00.003871
Markers
Fixtures	unittest_setUpClass_fixture_Test_ClusterClassifier_Generator request

Setup

Call

Teardown

PASSED Test_ClusterClassifier_Generator::test_init_from_path_strings 0:00:00.004165

Started	2023-08-11 12:59:42
Ended	2023-08-11 12:59:42
Duration	0:00:00.004165
Markers
Fixtures	unittest_setUpClass_fixture_Test_ClusterClassifier_Generator request

Setup

Call

Teardown

PASSED Test_ClusterClassifier_Generator::test_preview_classifiers 0:00:05.360520

Started	2023-08-11 12:59:42
Ended	2023-08-11 12:59:47
Duration	0:00:05.360520
Markers
Fixtures	unittest_setUpClass_fixture_Test_ClusterClassifier_Generator request

Setup

Call

Captured stdout call

2023/08/11 12:59:42:   Clustering Landsat-8 OLI_TIRS reference cube (5 clusters)...
Using SAM class assignment.
Performing spectral angle mapper (SAM) image classification...
2023/08/11 12:59:44:   Creating LR cluster classifier to predict Sentinel-2A MSI from Landsat-8 OLI_TIRS...
2023/08/11 12:59:44:   Clustering Sentinel-2A MSI reference cube (5 clusters)...
Using SAM class assignment.
Performing spectral angle mapper (SAM) image classification...
2023/08/11 12:59:46:   Creating LR cluster classifier to predict Landsat-8 OLI_TIRS from Sentinel-2A MSI...

Captured stderr call

Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
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Coverage.py warning: No data was collected. (no-data-collected)
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Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
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Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
2023/08/11 12:59:44:   Had to choose spectra with SD up to 353.2 for cluster #0.
2023/08/11 12:59:44:   Had to choose spectra with SD up to 847.7 for cluster #3.
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
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Coverage.py warning: No data was collected. (no-data-collected)
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Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
2023/08/11 12:59:46:   Had to choose spectra with SD up to 904.2 for cluster #3.

  0%|          | 0/5 [00:00<?, ?it/s]
 40%|████      | 2/5 [00:00<00:00, 11.95it/s]
 80%|████████  | 4/5 [00:00<00:00, 11.99it/s]
100%|██████████| 5/5 [00:00<00:00, 11.97it/s]

Teardown

tests/test_clustering.py 9 0:00:02.003016

PASSED Test_KMeansRSImage::test_apply_clusters 0:00:00.984397

Started	2023-08-11 12:59:47
Ended	2023-08-11 12:59:48
Duration	0:00:00.984397
Markers
Fixtures	unittest_setUpClass_fixture_Test_KMeansRSImage request

Setup

Call

Teardown

PASSED Test_KMeansRSImage::test_compute_clusters 0:00:00.837084

Started	2023-08-11 12:59:48
Ended	2023-08-11 12:59:49
Duration	0:00:00.837084
Markers
Fixtures	unittest_setUpClass_fixture_Test_KMeansRSImage request

Setup

Call

Teardown

PASSED Test_KMeansRSImage::test_get_purest_spectra_from_each_cluster 0:00:00.018581

Started	2023-08-11 12:59:49
Ended	2023-08-11 12:59:49
Duration	0:00:00.018581
Markers
Fixtures	unittest_setUpClass_fixture_Test_KMeansRSImage request

Setup

Call

Teardown

PASSED Test_KMeansRSImage::test_get_random_spectra_from_each_cluster 0:00:00.063871

Started	2023-08-11 12:59:49
Ended	2023-08-11 12:59:49
Duration	0:00:00.063871
Markers
Fixtures	unittest_setUpClass_fixture_Test_KMeansRSImage request

Setup

Call

Captured stdout call

Performing spectral angle mapper (SAM) image classification...

Captured stderr call


  0%|          | 0/1 [00:00<?, ?it/s]
100%|██████████| 1/1 [00:00<00:00, 31.97it/s]

Teardown

PASSED Test_KMeansRSImage::test_plot_cluster_centers 0:00:00.036331

Started	2023-08-11 12:59:49
Ended	2023-08-11 12:59:49
Duration	0:00:00.036331
Markers
Fixtures	unittest_setUpClass_fixture_Test_KMeansRSImage request

Setup

Call

Teardown

PASSED Test_KMeansRSImage::test_plot_cluster_histogram 0:00:00.033128

Started	2023-08-11 12:59:49
Ended	2023-08-11 12:59:49
Duration	0:00:00.033128
Markers
Fixtures	unittest_setUpClass_fixture_Test_KMeansRSImage request

Setup

Call

Teardown

PASSED Test_KMeansRSImage::test_plot_clustered_image 0:00:00.027455

Started	2023-08-11 12:59:49
Ended	2023-08-11 12:59:49
Duration	0:00:00.027455
Markers
Fixtures	unittest_setUpClass_fixture_Test_KMeansRSImage request

Setup

Call

Teardown

PASSED Test_KMeansRSImage::test_spectral_angles 0:00:00.000925

Started	2023-08-11 12:59:49
Ended	2023-08-11 12:59:49
Duration	0:00:00.000925
Markers
Fixtures	unittest_setUpClass_fixture_Test_KMeansRSImage request

Setup

Call

Teardown

PASSED Test_KMeansRSImage::test_spectral_distances 0:00:00.001243

Started	2023-08-11 12:59:49
Ended	2023-08-11 12:59:49
Duration	0:00:00.001243
Markers
Fixtures	unittest_setUpClass_fixture_Test_KMeansRSImage request

Setup

Call

Teardown

tests/test_prediction.py 10 0:00:03.346617

PASSED Test_SpectralHomogenizer::test_interpolate_cube_linear 0:00:00.002616

Started	2023-08-11 12:59:49
Ended	2023-08-11 12:59:49
Duration	0:00:00.002616
Markers
Fixtures	unittest_setUpClass_fixture_Test_SpectralHomogenizer request

Setup

Call

Captured stdout call

2023/08/11 12:59:49:   Performing spectral homogenization (linear interpolation) with target wavelength positions at 500.0, 700.0 and 1300.0 nm.

Teardown

PASSED Test_SpectralHomogenizer::test_interpolate_cube_quadratic 0:00:00.002737

Started	2023-08-11 12:59:49
Ended	2023-08-11 12:59:49
Duration	0:00:00.002737
Markers
Fixtures	unittest_setUpClass_fixture_Test_SpectralHomogenizer request

Setup

Call

Captured stdout call

2023/08/11 12:59:49:   Performing spectral homogenization (quadratic interpolation) with target wavelength positions at 500.0, 700.0 and 1300.0 nm.

Teardown

PASSED Test_SpectralHomogenizer::test_predict_by_machine_learner__LR_L8_S2 0:00:00.682955

Test linear regression from Landsat-8 to Sentinel-2A.

Started	2023-08-11 12:59:49
Ended	2023-08-11 12:59:50
Duration	0:00:00.682955
Markers
Fixtures	unittest_setUpClass_fixture_Test_SpectralHomogenizer request

Setup

Call

Captured stdout call

2023/08/11 12:59:49: Performing spectral homogenization using LR. Target is Sentinel-2A MSI ['1', '2', '3', '4', '5', '6', '7', '8', '8A', '11', '12'].
2023/08/11 12:59:49: Assigning material-specific regressors to each image pixel.
Performing spectral angle mapper (SAM) image classification...
2023/08/11 12:59:50: Total classification time: 00:00:00
2023/08/11 12:59:50: Starting prediction with LR regressor, 50 clusters, SAM.
2023/08/11 12:59:50: Total prediction time: 00:00:00
2023/08/11 12:59:50: No-data fraction: 0.0%
2023/08/11 12:59:50: Regressor fractions: 90.0% material optimized; 10.0% global regressor
2023/08/11 12:59:50: Inpainting error values for cluster #-1...
2023/08/11 12:59:50: Inpainting error values for cluster #0...
2023/08/11 12:59:50: Inpainting error values for cluster #1...
2023/08/11 12:59:50: Inpainting error values for cluster #2...
2023/08/11 12:59:50: Inpainting error values for cluster #3...
2023/08/11 12:59:50: Inpainting error values for cluster #6...
2023/08/11 12:59:50: Inpainting error values for cluster #7...
2023/08/11 12:59:50: Inpainting error values for cluster #8...
2023/08/11 12:59:50: Inpainting error values for cluster #10...
2023/08/11 12:59:50: Inpainting error values for cluster #11...
2023/08/11 12:59:50: Inpainting error values for cluster #12...
2023/08/11 12:59:50: Inpainting error values for cluster #13...
2023/08/11 12:59:50: Inpainting error values for cluster #14...
2023/08/11 12:59:50: Inpainting error values for cluster #15...
2023/08/11 12:59:50: Inpainting error values for cluster #16...
2023/08/11 12:59:50: Inpainting error values for cluster #17...
2023/08/11 12:59:50: Inpainting error values for cluster #18...
2023/08/11 12:59:50: Inpainting error values for cluster #20...
2023/08/11 12:59:50: Inpainting error values for cluster #21...
2023/08/11 12:59:50: Inpainting error values for cluster #22...
2023/08/11 12:59:50: Inpainting error values for cluster #23...
2023/08/11 12:59:50: Inpainting error values for cluster #24...
2023/08/11 12:59:50: Inpainting error values for cluster #26...
2023/08/11 12:59:50: Inpainting error values for cluster #27...
2023/08/11 12:59:50: Inpainting error values for cluster #28...
2023/08/11 12:59:50: Inpainting error values for cluster #29...
2023/08/11 12:59:50: Inpainting error values for cluster #30...
2023/08/11 12:59:50: Inpainting error values for cluster #31...
2023/08/11 12:59:50: Inpainting error values for cluster #32...
2023/08/11 12:59:50: Inpainting error values for cluster #34...
2023/08/11 12:59:50: Inpainting error values for cluster #35...
2023/08/11 12:59:50: Inpainting error values for cluster #36...
2023/08/11 12:59:50: Inpainting error values for cluster #37...
2023/08/11 12:59:50: Inpainting error values for cluster #38...
2023/08/11 12:59:50: Inpainting error values for cluster #39...
2023/08/11 12:59:50: Inpainting error values for cluster #40...
2023/08/11 12:59:50: Inpainting error values for cluster #41...
2023/08/11 12:59:50: Inpainting error values for cluster #42...
2023/08/11 12:59:50: Inpainting error values for cluster #43...
2023/08/11 12:59:50: Inpainting error values for cluster #44...
2023/08/11 12:59:50: Inpainting error values for cluster #45...
2023/08/11 12:59:50: Inpainting error values for cluster #46...
2023/08/11 12:59:50: Inpainting error values for cluster #47...
2023/08/11 12:59:50: Inpainting error values for cluster #48...
2023/08/11 12:59:50: Inpainting error values for cluster #49...

Captured stderr call

Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
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Coverage.py warning: No data was collected. (no-data-collected)
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Coverage.py warning: No data was collected. (no-data-collected)
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Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)

Predicting in chunks:   0%|          | 0/1 [00:00<?, ?it/s]
Predicting in chunks: 100%|██████████| 1/1 [00:00<00:00, 77.33it/s]

Teardown

PASSED Test_SpectralHomogenizer::test_predict_by_machine_learner__LR_RF_L8_S2 0:00:00.912728

Test linear regression from Landsat-8 to Sentinel-2A.

Started	2023-08-11 12:59:50
Ended	2023-08-11 12:59:51
Duration	0:00:00.912728
Markers
Fixtures	unittest_setUpClass_fixture_Test_SpectralHomogenizer request

Setup

Call

Captured stdout call

2023/08/11 12:59:50:   Performing spectral homogenization using LR. Target is Sentinel-2A MSI ['1', '2', '3', '4', '5', '6', '7', '8', '8A', '11', '12'].
2023/08/11 12:59:50:   Assigning material-specific regressors to each image pixel.
Performing random forest image classification...
2023/08/11 12:59:51:   Total classification time: 00:00:00
2023/08/11 12:59:51:   Starting prediction with LR regressor, 5 clusters, RF.
2023/08/11 12:59:51:   Total prediction time: 00:00:00
2023/08/11 12:59:51:   Inpainting error values for cluster #0...
2023/08/11 12:59:51:   Inpainting error values for cluster #1...
2023/08/11 12:59:51:   Inpainting error values for cluster #2...
2023/08/11 12:59:51:   Inpainting error values for cluster #3...
2023/08/11 12:59:51:   Inpainting error values for cluster #4...

Captured stderr call

Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)

Predicting in chunks:   0%|          | 0/1 [00:00<?, ?it/s]
Predicting in chunks: 100%|██████████| 1/1 [00:00<00:00, 310.74it/s]

Teardown

PASSED Test_SpectralHomogenizer::test_predict_by_machine_learner__LR_kNN_SAM_L8_S2 0:00:00.876449

Test linear regression using kNN_SAM from Landsat-8 to Sentinel-2A.

Started	2023-08-11 12:59:51
Ended	2023-08-11 12:59:52
Duration	0:00:00.876449
Markers
Fixtures	unittest_setUpClass_fixture_Test_SpectralHomogenizer request

Setup

Call

Captured stdout call

2023/08/11 12:59:51:   Performing spectral homogenization using LR. Target is Sentinel-2A MSI ['1', '2', '3', '4', '5', '6', '7', '8', '8A', '11', '12'].
2023/08/11 12:59:51:   Assigning material-specific regressors to each image pixel.
Performing k-nearest neighbour spectral angle mapper (kNN_SAM; k=10) image classification...
2023/08/11 12:59:52:   Total classification time: 00:00:00
2023/08/11 12:59:52:   Computing prediction weights per pixel for each regressor.
2023/08/11 12:59:52:   Starting prediction with LR regressor, 50 clusters, kNN_SAM.
2023/08/11 12:59:52:   Total prediction time: 00:00:00
2023/08/11 12:59:52:   No-data fraction:	0.0%
2023/08/11 12:59:52:   Regressor fractions:	90.0% material optimized; 10.0% global regressor

Captured stderr call

Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)

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Predicting in chunks: 100%|██████████| 1/1 [00:00<00:00, 11.11it/s]

Teardown

PASSED Test_SpectralHomogenizer::test_predict_by_machine_learner__QR_L8_S2 0:00:00.010552

Test quadratic regression from Landsat-8 to Sentinel-2A.

Started	2023-08-11 12:59:52
Ended	2023-08-11 12:59:52
Duration	0:00:00.010552
Markers
Fixtures	unittest_setUpClass_fixture_Test_SpectralHomogenizer request

Setup

Call

Captured stdout call

2023/08/11 12:59:52:   Performing spectral homogenization using QR. Target is Sentinel-2A MSI ['1', '2', '3', '4', '5', '6', '7', '8', '8A', '11', '12'].
2023/08/11 12:59:52:   Starting prediction with QR regressor, 1 clusters, MinDist.
2023/08/11 12:59:52:   Total prediction time: 00:00:00
2023/08/11 12:59:52:   Inpainting error values for cluster #0...

Captured stderr call


Predicting in chunks:   0%|          | 0/1 [00:00<?, ?it/s]
Predicting in chunks: 100%|██████████| 1/1 [00:00<00:00, 243.94it/s]

Teardown

PASSED Test_SpectralHomogenizer::test_predict_by_machine_learner__QR_cluster_L8_S2 0:00:00.679988

Test quadratic regression including spectral clusters from Landsat-8 to Sentinel-2A.

Started	2023-08-11 12:59:52
Ended	2023-08-11 12:59:53
Duration	0:00:00.679988
Markers
Fixtures	unittest_setUpClass_fixture_Test_SpectralHomogenizer request

Setup

Call

Captured stdout call

2023/08/11 12:59:52: Performing spectral homogenization using QR. Target is Sentinel-2A MSI ['1', '2', '3', '4', '5', '6', '7', '8', '8A', '11', '12'].
2023/08/11 12:59:52: Assigning material-specific regressors to each image pixel.
Performing minimum distance (nearest centroid) image classification...
2023/08/11 12:59:53: Total classification time: 00:00:00
2023/08/11 12:59:53: Starting prediction with QR regressor, 50 clusters, MinDist.
2023/08/11 12:59:53: Total prediction time: 00:00:00
2023/08/11 12:59:53: No-data fraction: 0.0%
2023/08/11 12:59:53: Regressor fractions: 90.0% material optimized; 10.0% global regressor
2023/08/11 12:59:53: Inpainting error values for cluster #-1...
2023/08/11 12:59:53: Inpainting error values for cluster #1...
2023/08/11 12:59:53: Inpainting error values for cluster #3...
2023/08/11 12:59:53: Inpainting error values for cluster #6...
2023/08/11 12:59:53: Inpainting error values for cluster #7...
2023/08/11 12:59:53: Inpainting error values for cluster #8...
2023/08/11 12:59:53: Inpainting error values for cluster #10...
2023/08/11 12:59:53: Inpainting error values for cluster #11...
2023/08/11 12:59:53: Inpainting error values for cluster #14...
2023/08/11 12:59:53: Inpainting error values for cluster #15...
2023/08/11 12:59:53: Inpainting error values for cluster #17...
2023/08/11 12:59:53: Inpainting error values for cluster #18...
2023/08/11 12:59:53: Inpainting error values for cluster #20...
2023/08/11 12:59:53: Inpainting error values for cluster #22...
2023/08/11 12:59:53: Inpainting error values for cluster #23...
2023/08/11 12:59:53: Inpainting error values for cluster #24...
2023/08/11 12:59:53: Inpainting error values for cluster #27...
2023/08/11 12:59:53: Inpainting error values for cluster #28...
2023/08/11 12:59:53: Inpainting error values for cluster #32...
2023/08/11 12:59:53: Inpainting error values for cluster #34...
2023/08/11 12:59:53: Inpainting error values for cluster #36...
2023/08/11 12:59:53: Inpainting error values for cluster #39...
2023/08/11 12:59:53: Inpainting error values for cluster #44...
2023/08/11 12:59:53: Inpainting error values for cluster #45...
2023/08/11 12:59:53: Inpainting error values for cluster #49...

Captured stderr call

Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)

Predicting in chunks:   0%|          | 0/1 [00:00<?, ?it/s]
Predicting in chunks: 100%|██████████| 1/1 [00:00<00:00, 71.12it/s]

Teardown

PASSED Test_SpectralHomogenizer::test_predict_by_machine_learner__classifierFileNotFound 0:00:00.001499

Test if an error is raised when the classifier file is not found.

Started	2023-08-11 12:59:53
Ended	2023-08-11 12:59:53
Duration	0:00:00.001499
Markers
Fixtures	unittest_setUpClass_fixture_Test_SpectralHomogenizer request

Setup

Call

Teardown

PASSED Test_SpectralHomogenizer::test_predict_by_machine_learner__fallbackAlgorithm 0:00:00.015597

Test fallback algorithm in case prediction fails.

Started	2023-08-11 12:59:53
Ended	2023-08-11 12:59:53
Duration	0:00:00.015597
Markers
Fixtures	unittest_setUpClass_fixture_Test_SpectralHomogenizer request

Setup

Call

Captured stdout call

2023/08/11 12:59:53:   Performing spectral homogenization (linear interpolation) with target wavelength positions at 1, 2, 3, 4, 5, 6, 7, 8, 9, 10 and 11 nm.
2023/08/11 12:59:53:   Performing spectral homogenization (linear interpolation) with target wavelength positions at 1, 2, 3, 4, 5, 6, 7, 8, 9, 10 and 11 nm.

Teardown

PASSED Test_RSImage_ClusterPredictor::test_predict 0:00:00.161496

Started	2023-08-11 12:59:53
Ended	2023-08-11 12:59:53
Duration	0:00:00.161496
Markers
Fixtures	unittest_setUpClass_fixture_Test_RSImage_ClusterPredictor request

Setup

Call

Captured stdout call

2023/08/11 12:59:53:   Assigning material-specific regressors to each image pixel.
Performing k-nearest neighbour spectral angle mapper (kNN_SAM; k=3) image classification...
2023/08/11 12:59:53:   Total classification time: 00:00:00
2023/08/11 12:59:53:   Computing prediction weights per pixel for each regressor.
2023/08/11 12:59:53:   Starting prediction with LR regressor, 50 clusters, kNN_SAM.
2023/08/11 12:59:53:   Total prediction time: 00:00:00
2023/08/11 12:59:53:   No-data fraction:	0.0%
2023/08/11 12:59:53:   Regressor fractions:	70.0% material optimized; 30.0% global regressor
2023/08/11 12:59:53:   Assigning material-specific regressors to each image pixel.
Performing k-nearest neighbour fused euclidian distance / spectral angle (kNN_FEDSA; k=3) image classification...
2023/08/11 12:59:53:   Total classification time: 00:00:00
2023/08/11 12:59:53:   Computing prediction weights per pixel for each regressor.
2023/08/11 12:59:53:   Starting prediction with LR regressor, 50 clusters, kNN_FEDSA.
2023/08/11 12:59:53:   Total prediction time: 00:00:00
2023/08/11 12:59:53:   Assigning material-specific regressors to each image pixel.
Performing k-nearest neighbour minimum distance (nearest centroid) (kNN_MinDist; k=3) image classification...
2023/08/11 12:59:53:   Total classification time: 00:00:00
2023/08/11 12:59:53:   Computing prediction weights per pixel for each regressor.
2023/08/11 12:59:53:   Starting prediction with LR regressor, 50 clusters, kNN_MinDist.
2023/08/11 12:59:53:   Total prediction time: 00:00:00
2023/08/11 12:59:53:   No-data fraction:	0.0%
2023/08/11 12:59:53:   Regressor fractions:	33.3% material optimized; 66.7% global regressor
2023/08/11 12:59:53:   Assigning material-specific regressors to each image pixel.
Performing minimum distance (nearest centroid) image classification...
2023/08/11 12:59:53:   Total classification time: 00:00:00
2023/08/11 12:59:53:   Starting prediction with LR regressor, 50 clusters, MinDist.
2023/08/11 12:59:53:   Total prediction time: 00:00:00
2023/08/11 12:59:53:   Assigning material-specific regressors to each image pixel.
Performing spectral angle mapper (SAM) image classification...
2023/08/11 12:59:53:   Total classification time: 00:00:00
2023/08/11 12:59:53:   Starting prediction with LR regressor, 50 clusters, SAM.
2023/08/11 12:59:53:   Total prediction time: 00:00:00
2023/08/11 12:59:53:   Assigning material-specific regressors to each image pixel.
Performing spectral information divergence (SID) image classification...
2023/08/11 12:59:53:   Total classification time: 00:00:00
2023/08/11 12:59:53:   Starting prediction with LR regressor, 50 clusters, SID.
2023/08/11 12:59:53:   Total prediction time: 00:00:00

Captured stderr call


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Predicting in chunks: 100%|██████████| 1/1 [00:00<00:00, 137.38it/s]

Teardown

tests/test_resampling.py 3 0:00:00.750164

PASSED Test_SpectralResampler::test_resample_image 0:00:00.730463

Started	2023-08-11 12:59:53
Ended	2023-08-11 12:59:54
Duration	0:00:00.730463
Markers
Fixtures	unittest_setUpClass_fixture_Test_SpectralResampler request

Setup

Call

Captured stderr call

Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)

Teardown

PASSED Test_SpectralResampler::test_resample_signature 0:00:00.008377

Started	2023-08-11 12:59:54
Ended	2023-08-11 12:59:54
Duration	0:00:00.008377
Markers
Fixtures	unittest_setUpClass_fixture_Test_SpectralResampler request

Setup

Call

Teardown

PASSED Test_SpectralResampler::test_resample_signature_with_nodata 0:00:00.011324

Started	2023-08-11 12:59:54
Ended	2023-08-11 12:59:54
Duration	0:00:00.011324
Markers
Fixtures	unittest_setUpClass_fixture_Test_SpectralResampler request

Setup

Call

Teardown

tests/test_utils.py 3 0:00:37.997013

PASSED Test_Utils::test_download_pretrained_classifiers 0:00:35.215277

Started	2023-08-11 12:59:54
Ended	2023-08-11 13:00:29
Duration	0:00:35.215277
Markers
Fixtures	unittest_setUpClass_fixture_Test_Utils request

Setup

Call

Teardown

PASSED Test_Utils::test_export_classifiers_as_JSON 0:00:02.111711

Started	2023-08-11 13:00:29
Ended	2023-08-11 13:00:31
Duration	0:00:02.111711
Markers
Fixtures	unittest_setUpClass_fixture_Test_Utils request

Setup

Call

Captured stderr call

Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)

  0%|          | 0/1 [00:00<?, ?it/s]
100%|██████████| 1/1 [00:00<00:00, 30.84it/s]
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)

  0%|          | 0/1 [00:00<?, ?it/s]
  0%|          | 0/1 [00:00<?, ?it/s]

Teardown

PASSED Test_Utils::test_list_available_transformations 0:00:00.670025

Started	2023-08-11 13:00:31
Ended	2023-08-11 13:00:32
Duration	0:00:00.670025
Markers
Fixtures	unittest_setUpClass_fixture_Test_Utils request

Setup

Call

Captured stderr call

Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)
Coverage.py warning: No data was collected. (no-data-collected)